Julian Parkhill - Selected Publications#

Overall publication metrics: ~640 total articles; >107,000 citations, H-index: 142 (Google Scholar)
* = corresponding author, # = joint authors. Citation data from Google Scholar)

de Goffau MC, Lager S, Sovio U, Gaccioli F, Cook E, Peacock SJ, Parkhill J*, Charnock-Jones DS, Smith GCS* (2019) Human placenta has no microbiome but can contain potential pathogens. Nature 572: 329-334
186 citations. Altmetric score: 657 (99th percentile compared to outputs of the same age)

Kallonen T, Brodrick HJ, Harris SR, Corander J, Brown NM, Martin V, Peacock SJ, Parkhill J (2017) Systematic longitudinal survey of invasive Escherichia coli in England demonstrates a stable population structure only transiently disturbed by the emergence of ST131. Genome Res 27: 1437
105 citations. Altmetric score: 62 (95th percentile compared to outputs of the same age)

Bryant JM, Grogono DM, Rodriguez-Rincon D, Everall I, Brown KP, Moreno P, Verma D, Hill E, Drijkoningen J, Gilligan P, Esther CR, Noone PG, Giddings O, Bell SC, Thomson R, Wainwright CE, Coulter C, Pandey S, Wood ME, Stockwell RE, Ramsay KA, Sherrard LJ, Kidd TJ, Jabbour N, Johnson GR, Knibbs LD, Morawska L, Sly PD, Jones A, Bilton D, Laurenson I, Ruddy M, Bourke S, Bowler IC, Chapman SJ, Clayton A, Cullen M, Dempsey O, Denton M, Desai M, Drew RJ, Edenborough F, Evans J, Folb J, Daniels T, Humphrey H, Isalska B, Jensen-Fangel S, Jonsson B, Jones AM, Katzenstein TL, Lillebaek T, MacGregor G, Mayell S, Millar M, Modha D, Nash EF, O'Brien C, O'Brien D, Ohri C, Pao CS, Peckham D, Perrin F, Perry A, Pressler T, Prtak L, Qvist T, Robb A, Rodgers H, Schaffer K, Shafi N, van Ingen J, Walshaw M, Watson D, West N, Whitehouse J, Haworth CS, Harris SR, Ordway D, Parkhill J*, Floto RA* (2016) Emergence and spread of a human-transmissible multidrug-resistant nontuberculous mycobacterium. Science 354: 751-757
275 citations. Altmetric score: 359 (99th percentile compared to outputs of the same age)

David S, Rusniok C, Mentasti M, Gomez-Valero L, Harris SR, Lechat P, Lees J, Ginevra C, Glaser P, Ma L, Bouchier C, Underwood A, Jarraud S, Harrison TG, Parkhill J*, Buchrieser C* (2016) Multiple major disease-associated clones of Legionella pneumophila have emerged recently and independently. Genome Res 26: 1555-1564
53 citations. Altmetric score: 33 (93rd percentile compared to outputs of the same age)

Chewapreecha, C., Marttinen, P., Croucher, N.J., Salter, S.J., Harris, S.R., Mather, A.E., Hanage, W.P., Goldblatt, D., Nosten, F.H., Turner, C., Turner, P., Bentley, S.D. and Parkhill, J. (2014) Comprehensive Identification of Single Nucleotide Polymorphisms Associated with Beta-lactam Resistance within Pneumococcal Mosaic Genes. PLoS Genet, 10, e1004547.
151 citations. Altmetric score: 59 (97th percentile compared to outputs of the same age)

Bart, M.J., Harris, S.R., Advani, A., Arakawa, Y., Bottero, D., Bouchez, V., Cassiday, P.K., Chiang, C.S., Dalby, T., Fry, N.K., Gaillard, M.E., van Gent, M., Guiso, N., Hallander, H.O., Harvill, E.T., He, Q., van der Heide, H.G., Heuvelman, K., Hozbor, D.F., Kamachi, K., Karataev, G.I., Lan, R., Lutylska, A., Maharjan, R.P., Mertsola, J., Miyamura, T., Octavia, S., Preston, A., Quail, M.A., Sintchenko, V., Stefanelli, P., Tondella, M.L., Tsang, R.S., Xu, Y., Yao, S.M., Zhang, S., Parkhill, J.* and Mooi, F.R. (2014) Global population structure and evolution of Bordetella pertussis and their relationship with vaccination. MBio, 5, e01074.
217 citations. Altmetric score: 98 (98th percentile compared to outputs of the same age)

Salter, S.J., Cox, M.J., Turek, E.M., Calus, S.T., Cookson, W.O., Moffatt, M.F., Turner, P., Parkhill, J., Loman, N.J. and Walker, A.W. (2014) Reagent and laboratory contamination can critically impact sequence-based microbiome analyses. BMC Biol, 12, 87.
1717 citations. Altmetric score: 339 (99th percentile compared to outputs of the same age)

Harris, S.R., Cartwright, E.J., Torok, M.E., Holden, M.T., Brown, N.M., Ogilvy-Stuart, A.L., Ellington, M.J., Quail, M.A., Bentley, S.D., Parkhill, J.* and Peacock, S.J.* (2013) Whole-genome sequencing for analysis of an outbreak of meticillin-resistant Staphylococcus aureus: a descriptive study. Lancet Infect Dis, 13, 130-136.
535 citations. Altmetric score: 229 (99th percentile compared to outputs of the same age)

Mutreja, A., Kim, D.W., Thomson, N.R., Connor, T.R., Lee, J.H., Kariuki, S., Croucher, N.J., Choi, S.Y., Harris, S.R., Lebens, M., Niyogi, S.K., Kim, E.J., Ramamurthy, T., Chun, J., Wood, J.L., Clemens, J.D., Czerkinsky, C., Nair, G.B., Holmgren, J., Parkhill, J.* and Dougan, G. (2011) Evidence for several waves of global transmission in the seventh cholera pandemic. Nature, 477, 462-465.
562 citations. Altmetric score: 130 (99th percentile compared to outputs of the same age)

Harris, S.R., Feil, E.J., Holden, M.T., Quail, M.A., Nickerson, E.K., Chantratita, N., Gardete, S., Tavares, A., Day, N., Lindsay, J.A., Edgeworth, J.D., de Lencastre, H., Parkhill, J., Peacock, S.J. and Bentley, S.D. (2010) Evolution of MRSA during hospital transmission and intercontinental spread. Science, 327, 469-474.
1090 citations. Altmetric score: 72 (98th percentile compared to outputs of the same age)