Pavel Pevzner - Selected Publications#

h-index: 77 (according to Google Scholar)

Below is a sample of Pevzner's most cited and some recent publications

A. Bankevich, S. Nurk, D. Antipov, A. A Gurevich, M. Dvorkin, A. S Kulikov, V. M Lesin, S. I Nikolenko, S. Pham, A. D Prjibelski, A. V Pyshkin, A.V Sirotkin, N. Vyahhi, G. Tesler, M. A Alekseyev, P. A. Pevzner. SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing. Journal of Computational Biology 19, 455-477, 2012 (969 citations)

S Hannenhalli, PA Pevzner. Transforming cabbage into turnip: polynomial algorithm for sorting signed permutations by reversals. Journal of the ACM (JACM) 46, 1-27, 1999 (912 citations)

PA Pevzner, H Tang, MS Waterman. An Eulerian path approach to DNA fragment assembly. Proceedings of the National Academy of Sciences 98, 9748-9753 2001(882 citations)

V Dancik, TA Addona, KR Clauser, JE Vath, PA Pevzner. De novo peptide sequencing via tandem mass spectrometry
Journal of Computational Biology 6, 327-342,1999 (563 citations)

V Bafna, PA Pevzner. Genome rearrangements and sorting by reversals. SIAM Journal on Computing 25, 272-289 1996 (534 citations)

William J Murphy, Denis M Larkin, Annelie Everts-van der Wind, Guillaume Bourque, Glenn Tesler, Loretta Auvil, Jonathan E Beever, Bhanu P Chowdhary, Francis Galibert, Lisa Gatzke, Christophe Hitte, Stacey N Meyers, Denis Milan, Elaine A Ostrander, Greg Pape, Heidi G Parker, Terje Raudsepp, Margarita B Rogatcheva, Lawrence B Schook, Loren C Skow, Michael Welge, James E Womack, Stephen J O'Brien, Pavel A Pevzner, Harris A Lewin. Science 309 613-617, 2005 (454 citations)

H Chitsaz, JL Yee-Greenbaum, G Tesler, MJ Lombardo, CL Dupont, J. H Badger, M. Novotny, D. B Rusch, L. J Fraser, N. A Gormley, O. Schulz-Trieglaff, G. P Smith, D. J Evers, P. A Pevzner, R. S Lasken. Efficient de novo assembly of single-cell bacterial genomes from short-read data sets.Nature biotechnology 29, 915-92, 2011 (136 citations)

S Nurk, A Bankevich, D Antipov, AA Gurevich, A Korobeynikov, A Lapidus, A. D Prjibelski, A. Pyshkin, A. Sirotkin, Y. Sirotkin, R. Stepanauskas, S. R Clingenpeel, T. Woyke, J. S Mclean, R. Lasken, G. Tesler, M. A Alekseyev, P. A Pevzner. Assembling single-cell genomes and mini-metagenomes from chimeric MDA products. Journal of Computational Biology 20, 714-737, 2013 (116 citations)

X Liu, Y Sirotkin, Y Shen, G Anderson, YS Tsai, YS Ting, DR Goodlett, R. D Smith, V. Bafna, P. A Pevzner. Protein identification using top-down spectra. Molecular & cellular proteomics 11, M111. 008524 47 2012 (60 citations)

A. Bankevich. P.A. Pevzner. TruSPAdes: Barcode Assembly of TruSeq Synthetic Long Reads. Nature Methods, 2016
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