Michael Bruford - Selected Publications#

1. Shafer ABA, Wolf JBW, Alves PC, Bergstrom L, Bruford MW, Brannstrom I, Colling G, Dalen L, De Meester L, Ekblom R, Fawcett KD, Fior S, Hajibabaei M, Hill JA, Hoezel AR, Hoglund J, Jensen EL, Krause J, Kristensen TN, Krutzen M, McKay JK, Norman AJ, Ogden R, Osterling EM, Ouborg NJ, Piccolo J, Popovic D, Primmer CR, Reed FA, Roumet M, Salmona J, Schenekar T, Schwartz MK, Segelbacher G, Senn H, Thaulow J, Valtonen M, Veale A, Vergeer P, Nagarjun V, Vila C, Weissensteiner M, Wennerstrom L, Wheat CW, Zielinski P (2015) Genomics and the challenging translation into conservation practice. Trends Ecol Evol. 30: 78-84.

2. Barbato M, Orozco-terWengel P, Tapio M, Bruford MW (2015) SNeP: a tool to estimate trends in recent effective population size trajectories using genome-wide SNP data. Frontiers Genet. 6: 109.

3. Bruford MW, Ginja C, Hoffmann I et 40 alia (2015) Prospects and challenges for the conservation of farm animal genomic resources 2015-2025. Frontiers in Genetics 6: 314.

4. Moodley Y, Russo I-R M, Dalton DL, Kotze A, Muya S, Haubensak P, Balint B, Munimanda GK, Diemel C, Setzer A, Dicks K, Herzig-Straschil B, Kalthoff DC, Siegismund HR, Robovsky J, O’Donoghue P, Bruford MW (2017) Extinctions, genetic erosion and conservation options for the black rhinoceros (Diceros bicornis). Sci Rep. 7: 41417.

5. Pan S, Zhang T, Rong Z, Hu L, Gu Z, Wu Q, Dong S, Liu Q, Lin Z, Deutschova L, Li X, Dixon A, Bruford MW, Zhan X (2017) Population transcriptomes reveal synergistic responses of DNA polymorphism and RNA expression to extreme environments on the Qinghai–Tibetan Plateau in a predatory bird. Mol Ecol 26: 2993-3010.

6. Moodley Y, Russo IM, Robovsky J, Dalton DL, Kotze A, Smith S, Stejskal J, Ryder OA, Hermes R, Walzer C, Bruford MW (2018) Contrasting evolutionary history, anthropogenic declines and genetic contact in the northern and southern white rhinoceros (Caratotherium simum). Proc R. Soc. Lond B. 285: 20181567.

7. Alberto FJ, Boyer F, Orozco-terWengel P, Streeter I, Servin B, de Villemereuil P, Benjelloun B, Librado P, Biscarini F, Colli L, Barbato M, Zamani W, Alberti A, Engelen S, Stella A, Joost S, Ajmone-Marsan P, Negrini R, Orlando L, Reza Rezaei H, Naderi S, Clarke L, Flicek P, Wincker P, Coissac E, Kijas J, Tosser-Klopp G, Chikhi A, Bruford MW, Taberlet P, Pompanon F (2018) Convergent genomic signatures of domestication in sheep and Goats. Nature Comms. 9: 813.

8. Pan S, Bruford MW, Wang Y, Lin Z, Gu Z, Hou X, Deng X, Dixon A, Graves JAM, Zhan X (2018) Transcription-associated mutation promotes RNA complexity in highly expressed genes – a major new source of selectable variation. Mol Biol Evol 35: 1104-1119.

9. Wei F, Costanza R, Dai Q, Stoeckl N, Gu X, Farber S, Nie Y, Kubiszewski I, Hu Y, Swaisgood R, Yang X, Bruford MW, Chen Y, Voinov A, Qi D, Owen M, Li Y, Kenny DC, Zhang Z, Hou R, Jiang S, Liu H, Zhan X, Zhang L, Yang B, Zhao L, Zheng X, Zhou W, Wen Y, Gao H, Zhang W (2018) The value of ecosystem services from giant panda reserves. Curr Biol 28:2174-2180.

10. Laikre L, Hoban S, Bruford MW, Segelbacher G, Allendorf FW, Gajardo G, González Rodríguez A, Hedrick PW, Heuertz M, Hohenlohe PA, Jaffé R, Johannesson K, Liggins L, MacDonald AJ, Orozco-terWengel P, Reusch TBH, Rodríguez-Correa H, Russo IM, Ryman N, Vernesi C (2020) Post-2020 goals overlook genetic diversity. Science 367: 1083-1085.

11. Li X, Yang J, Shen M, Xie1 XL, Liu GJ, Xu YX, Lv FH, Yang H, Yang YL, Liu CB, Zhou P, Wan PC, Zhang YS, Gao L, Yang JQ, Pi WH, Ren YL, Shen ZQ, Wang F, Deng J, Xu SS, Salehian-Dehkordi H, Hehua E, Esmailizadeh A, Dehghani-Qanatqestani M, Štěpánek O, Weimann C, Erhardt G, Amane A, Mwacharo JM, Han JL, Hanotte O, Lenstra JA, Kantanen J, Coltman DW, Kijas JW, Bruford MW, Periasamy K, Wang XH, Li MH (2020) Whole-genome resequencing of wild and domestic sheep identifies genes associated with morphological and agronomic traits. Nature Comms https://doi.org/10.1038/s41467-020-16485-1.

12. Moodley Y, Westbury MV, Russo IM, Gopalakrishnan S, Rakotoarivelo A, Olsen RA, Prost S, Tunstall T, Ryder OA, Dalén L, Bruford MW (2020) Interspecific gene flow and the evolution of specialization in black and white rhinoceros. Mol Biol Evol doi.org/10.1093/molbev/msaa148.

13. Fan R, Gu Z, Guang X, Marin JC, Varas V, Gonzalez B, Wheeler JC, Hu Y, Li E, Sun X, Yang X, Zhang C, Gao W, He J, Munch K, Corbett-Detig R, Barbato M, Pan S, Zhan X, Bruford MW, Dong C (2020) Genomic analysis of the domestication and post-Spanish conquest evolution of the llama and alpaca. Genome Biol. 21: 159.